Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm25732-201ENSMUST00000175168 60 ntBASIC18.34■□□□□ 0.53
NclP09405 Gm27627-201ENSMUST00000183644 150 ntBASIC18.34■□□□□ 0.53
NclP09405 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC18.34■□□□□ 0.53
NclP09405 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC18.34■□□□□ 0.53
NclP09405 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC18.34■□□□□ 0.53
NclP09405 Gm18730-201ENSMUST00000218038 343 ntBASIC18.34■□□□□ 0.53
NclP09405 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NclP09405 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NclP09405 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NclP09405 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NclP09405 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC18.34■□□□□ 0.53
NclP09405 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NclP09405 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NclP09405 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NclP09405 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC18.34■□□□□ 0.53
NclP09405 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NclP09405 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC18.33■□□□□ 0.53
NclP09405 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
NclP09405 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NclP09405 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NclP09405 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NclP09405 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
NclP09405 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NclP09405 Gm23200-201ENSMUST00000104379 132 ntBASIC18.33■□□□□ 0.52
NclP09405 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC18.33■□□□□ 0.52
NclP09405 Mir6979-201ENSMUST00000183927 56 ntBASIC18.33■□□□□ 0.52
NclP09405 AY036118-201ENSMUST00000200021 923 ntBASIC18.33■□□□□ 0.52
NclP09405 Gm3786-201ENSMUST00000202659 378 ntBASIC18.33■□□□□ 0.52
NclP09405 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC18.33■□□□□ 0.52
NclP09405 AC159205.5-202ENSMUST00000224849 386 ntBASIC18.33■□□□□ 0.52
NclP09405 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
NclP09405 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NclP09405 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
NclP09405 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NclP09405 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC18.33■□□□□ 0.52
NclP09405 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NclP09405 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NclP09405 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NclP09405 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC18.33■□□□□ 0.52
NclP09405 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NclP09405 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NclP09405 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NclP09405 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NclP09405 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NclP09405 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NclP09405 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NclP09405 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NclP09405 Gm12566-201ENSMUST00000121479 359 ntBASIC18.32■□□□□ 0.52
NclP09405 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC18.32■□□□□ 0.52
NclP09405 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NclP09405 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NclP09405 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NclP09405 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NclP09405 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NclP09405 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NclP09405 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NclP09405 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NclP09405 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC18.32■□□□□ 0.52
NclP09405 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC18.32■□□□□ 0.52
NclP09405 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
NclP09405 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NclP09405 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC18.31■□□□□ 0.52
NclP09405 Gm11989-201ENSMUST00000117240 672 ntBASIC18.31■□□□□ 0.52
NclP09405 Gm11362-201ENSMUST00000118838 850 ntBASIC18.31■□□□□ 0.52
NclP09405 Gm12266-201ENSMUST00000120311 962 ntBASIC18.31■□□□□ 0.52
NclP09405 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC18.31■□□□□ 0.52
NclP09405 Gm17040-202ENSMUST00000170597 889 ntBASIC18.31■□□□□ 0.52
NclP09405 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NclP09405 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NclP09405 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Gm18227-201ENSMUST00000211082 1468 ntBASIC18.31■□□□□ 0.52
NclP09405 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NclP09405 Ntrk2-204ENSMUST00000224259 3049 ntBASIC18.31■□□□□ 0.52
NclP09405 Gm43721-201ENSMUST00000199677 2313 ntBASIC18.31■□□□□ 0.52
NclP09405 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NclP09405 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms