Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.25□□□□□ -0.29
Chrna1P04756 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.25□□□□□ -0.29
Chrna1P04756 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Chrna1P04756 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna1P04756 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna1P04756 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna1P04756 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna1P04756 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna1P04756 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Chrna1P04756 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.25□□□□□ -0.29
Chrna1P04756 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna1P04756 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Chrna1P04756 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Chrna1P04756 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Chrna1P04756 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna1P04756 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna1P04756 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chrna1P04756 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.24□□□□□ -0.29
Chrna1P04756 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Chrna1P04756 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Chrna1P04756 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Gm11450-201ENSMUST00000121144 333 ntBASIC13.24□□□□□ -0.29
Chrna1P04756 Gm9630-201ENSMUST00000178304 885 ntBASIC13.24□□□□□ -0.29
Chrna1P04756 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.24□□□□□ -0.29
Chrna1P04756 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.24□□□□□ -0.29
Chrna1P04756 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.24□□□□□ -0.29
Chrna1P04756 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Gm18711-201ENSMUST00000199341 750 ntBASIC13.24□□□□□ -0.29
Chrna1P04756 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.24□□□□□ -0.29
Chrna1P04756 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.24□□□□□ -0.29
Chrna1P04756 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Chrna1P04756 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Chrna1P04756 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Chrna1P04756 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chrna1P04756 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Chrna1P04756 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.23□□□□□ -0.29
Chrna1P04756 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.23□□□□□ -0.29
Chrna1P04756 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.23□□□□□ -0.29
Chrna1P04756 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.23□□□□□ -0.29
Chrna1P04756 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.23□□□□□ -0.29
Chrna1P04756 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Chrna1P04756 Gm18038-201ENSMUST00000197900 485 ntBASIC13.23□□□□□ -0.29
Chrna1P04756 Gm9555-201ENSMUST00000200908 583 ntBASIC13.23□□□□□ -0.29
Chrna1P04756 Gm44100-201ENSMUST00000204329 436 ntBASIC13.23□□□□□ -0.29
Chrna1P04756 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Chrna1P04756 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 Gm5369-201ENSMUST00000217499 588 ntBASIC13.23□□□□□ -0.29
Chrna1P04756 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.23□□□□□ -0.29
Chrna1P04756 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.23□□□□□ -0.29
Chrna1P04756 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.23□□□□□ -0.29
Chrna1P04756 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.23□□□□□ -0.29
Chrna1P04756 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.23□□□□□ -0.29
Chrna1P04756 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chrna1P04756 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Chrna1P04756 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.22□□□□□ -0.29
Chrna1P04756 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chrna1P04756 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.22□□□□□ -0.29
Chrna1P04756 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chrna1P04756 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.22□□□□□ -0.29
Chrna1P04756 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms