Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Matn4O89029 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Matn4O89029 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Matn4O89029 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Matn4O89029 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Matn4O89029 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Matn4O89029 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Matn4O89029 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Matn4O89029 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Matn4O89029 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.64□□□□□ -0.55
Matn4O89029 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.64□□□□□ -0.55
Matn4O89029 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Matn4O89029 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.64□□□□□ -0.55
Matn4O89029 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.64□□□□□ -0.55
Matn4O89029 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Matn4O89029 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Matn4O89029 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Matn4O89029 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.64□□□□□ -0.55
Matn4O89029 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Matn4O89029 Gm14928-201ENSMUST00000120198 477 ntBASIC11.64□□□□□ -0.55
Matn4O89029 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.64□□□□□ -0.55
Matn4O89029 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Gm27892-201ENSMUST00000185017 106 ntBASIC11.64□□□□□ -0.55
Matn4O89029 Gm44958-201ENSMUST00000203734 736 ntBASIC11.64□□□□□ -0.55
Matn4O89029 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.64□□□□□ -0.55
Matn4O89029 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.64□□□□□ -0.55
Matn4O89029 Gm45930-201ENSMUST00000221330 292 ntBASIC11.64□□□□□ -0.55
Matn4O89029 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.64□□□□□ -0.55
Matn4O89029 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.64□□□□□ -0.55
Matn4O89029 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.64□□□□□ -0.55
Matn4O89029 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Matn4O89029 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Matn4O89029 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Matn4O89029 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Matn4O89029 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Matn4O89029 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.64□□□□□ -0.55
Matn4O89029 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.64□□□□□ -0.55
Matn4O89029 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Matn4O89029 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.64□□□□□ -0.55
Matn4O89029 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.63□□□□□ -0.55
Matn4O89029 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Matn4O89029 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Matn4O89029 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Matn4O89029 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.63□□□□□ -0.55
Matn4O89029 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.63□□□□□ -0.55
Matn4O89029 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Matn4O89029 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
Matn4O89029 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.63□□□□□ -0.55
Matn4O89029 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.63□□□□□ -0.55
Matn4O89029 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.63□□□□□ -0.55
Matn4O89029 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.63□□□□□ -0.55
Matn4O89029 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.63□□□□□ -0.55
Matn4O89029 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.63□□□□□ -0.55
Matn4O89029 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.63□□□□□ -0.55
Matn4O89029 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.63□□□□□ -0.55
Matn4O89029 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Matn4O89029 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms