Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ClppO88696 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ClppO88696 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClppO88696 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
ClppO88696 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.14□□□□□ -0.47
ClppO88696 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.14□□□□□ -0.47
ClppO88696 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.14□□□□□ -0.47
ClppO88696 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.14□□□□□ -0.47
ClppO88696 Gm13097-201ENSMUST00000210722 397 ntBASIC12.14□□□□□ -0.47
ClppO88696 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.14□□□□□ -0.47
ClppO88696 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
ClppO88696 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
ClppO88696 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
ClppO88696 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
ClppO88696 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClppO88696 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Daam2-202ENSMUST00000224595 1926 ntBASIC12.13□□□□□ -0.47
ClppO88696 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
ClppO88696 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
ClppO88696 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ClppO88696 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ClppO88696 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.13□□□□□ -0.47
ClppO88696 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ClppO88696 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
ClppO88696 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Gm17376-201ENSMUST00000166016 84 ntBASIC12.13□□□□□ -0.47
ClppO88696 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.13□□□□□ -0.47
ClppO88696 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ClppO88696 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.13□□□□□ -0.47
ClppO88696 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Mir433-201ENSMUST00000093564 124 ntBASIC12.13□□□□□ -0.47
ClppO88696 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
ClppO88696 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ClppO88696 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.13□□□□□ -0.47
ClppO88696 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.13□□□□□ -0.47
ClppO88696 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ClppO88696 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClppO88696 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.12□□□□□ -0.47
ClppO88696 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.12□□□□□ -0.47
ClppO88696 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ClppO88696 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.12□□□□□ -0.47
ClppO88696 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms