Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarce1O54941 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarce1O54941 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarce1O54941 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Smarce1O54941 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.67□□□□□ -0.06
Smarce1O54941 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarce1O54941 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarce1O54941 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarce1O54941 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarce1O54941 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Smarce1O54941 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarce1O54941 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarce1O54941 Gm13315-201ENSMUST00000120376 991 ntBASIC14.67□□□□□ -0.06
Smarce1O54941 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarce1O54941 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.67□□□□□ -0.06
Smarce1O54941 Gm23119-201ENSMUST00000158610 140 ntBASIC14.67□□□□□ -0.06
Smarce1O54941 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarce1O54941 Gm18304-201ENSMUST00000189162 546 ntBASIC14.67□□□□□ -0.06
Smarce1O54941 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarce1O54941 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.67□□□□□ -0.06
Smarce1O54941 Gm7561-201ENSMUST00000211203 886 ntBASIC14.67□□□□□ -0.06
Smarce1O54941 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarce1O54941 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Smarce1O54941 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarce1O54941 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarce1O54941 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarce1O54941 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarce1O54941 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarce1O54941 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.67□□□□□ -0.06
Smarce1O54941 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarce1O54941 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarce1O54941 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smarce1O54941 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Smarce1O54941 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Smarce1O54941 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC14.66□□□□□ -0.06
Smarce1O54941 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Smarce1O54941 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.66□□□□□ -0.06
Smarce1O54941 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Smarce1O54941 Gm9083-201ENSMUST00000120423 819 ntBASIC14.66□□□□□ -0.06
Smarce1O54941 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.66□□□□□ -0.06
Smarce1O54941 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.66□□□□□ -0.06
Smarce1O54941 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.66□□□□□ -0.06
Smarce1O54941 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarce1O54941 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarce1O54941 Gm45925-201ENSMUST00000218882 744 ntBASIC14.66□□□□□ -0.06
Smarce1O54941 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
Smarce1O54941 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarce1O54941 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Smarce1O54941 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarce1O54941 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Smarce1O54941 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Smarce1O54941 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.65□□□□□ -0.06
Smarce1O54941 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarce1O54941 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarce1O54941 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smarce1O54941 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Smarce1O54941 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarce1O54941 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.65□□□□□ -0.06
Smarce1O54941 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Smarce1O54941 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smarce1O54941 Gm9794-201ENSMUST00000202370 423 ntBASIC14.65□□□□□ -0.06
Smarce1O54941 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarce1O54941 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarce1O54941 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarce1O54941 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarce1O54941 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarce1O54941 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarce1O54941 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarce1O54941 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarce1O54941 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Smarce1O54941 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Smarce1O54941 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarce1O54941 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarce1O54941 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarce1O54941 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms