Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.03□□□□□ -0.64
Alx4O35137 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Alx4O35137 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Alx4O35137 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Alx4O35137 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Alx4O35137 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Alx4O35137 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Alx4O35137 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Alx4O35137 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Alx4O35137 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Alx4O35137 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Alx4O35137 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.02□□□□□ -0.64
Alx4O35137 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Alx4O35137 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Alx4O35137 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Alx4O35137 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.02□□□□□ -0.65
Alx4O35137 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.02□□□□□ -0.65
Alx4O35137 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.02□□□□□ -0.65
Alx4O35137 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.02□□□□□ -0.65
Alx4O35137 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.02□□□□□ -0.65
Alx4O35137 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.02□□□□□ -0.65
Alx4O35137 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.02□□□□□ -0.65
Alx4O35137 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Alx4O35137 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.02□□□□□ -0.65
Alx4O35137 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.02□□□□□ -0.65
Alx4O35137 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.02□□□□□ -0.65
Alx4O35137 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Alx4O35137 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Alx4O35137 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Alx4O35137 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.01□□□□□ -0.65
Alx4O35137 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Alx4O35137 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.01□□□□□ -0.65
Alx4O35137 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.01□□□□□ -0.65
Alx4O35137 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Alx4O35137 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.01□□□□□ -0.65
Alx4O35137 Gm12363-201ENSMUST00000122250 668 ntBASIC11.01□□□□□ -0.65
Alx4O35137 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.01□□□□□ -0.65
Alx4O35137 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Alx4O35137 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.01□□□□□ -0.65
Alx4O35137 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.01□□□□□ -0.65
Alx4O35137 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.01□□□□□ -0.65
Alx4O35137 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.01□□□□□ -0.65
Alx4O35137 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Alx4O35137 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.01□□□□□ -0.65
Alx4O35137 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.01□□□□□ -0.65
Alx4O35137 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Alx4O35137 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Alx4O35137 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.01□□□□□ -0.65
Alx4O35137 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Alx4O35137 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Alx4O35137 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.01□□□□□ -0.65
Alx4O35137 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Alx4O35137 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Alx4O35137 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Alx4O35137 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Alx4O35137 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Alx4O35137 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.01□□□□□ -0.65
Alx4O35137 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Alx4O35137 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Alx4O35137 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11□□□□□ -0.65
Alx4O35137 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms