Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Polr1aO35134 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Polr1aO35134 Gm15615-201ENSMUST00000118876 198 ntBASIC18.65■□□□□ 0.58
Polr1aO35134 Gm12036-201ENSMUST00000120008 530 ntBASIC18.65■□□□□ 0.58
Polr1aO35134 Ighv1-60-201ENSMUST00000195816 405 ntBASIC18.65■□□□□ 0.58
Polr1aO35134 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC18.65■□□□□ 0.58
Polr1aO35134 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Polr1aO35134 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC18.65■□□□□ 0.58
Polr1aO35134 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Polr1aO35134 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Polr1aO35134 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Polr1aO35134 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Polr1aO35134 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Polr1aO35134 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Polr1aO35134 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Polr1aO35134 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Polr1aO35134 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
Polr1aO35134 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 Gm12628-201ENSMUST00000122193 382 ntBASIC18.64■□□□□ 0.57
Polr1aO35134 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC18.64■□□□□ 0.57
Polr1aO35134 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Polr1aO35134 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Polr1aO35134 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Polr1aO35134 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Polr1aO35134 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC18.64■□□□□ 0.57
Polr1aO35134 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC18.64■□□□□ 0.57
Polr1aO35134 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Polr1aO35134 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr1aO35134 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr1aO35134 Ighv2-1-201ENSMUST00000170946 353 ntBASIC18.63■□□□□ 0.57
Polr1aO35134 Gm29410-201ENSMUST00000188383 694 ntBASIC18.63■□□□□ 0.57
Polr1aO35134 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC18.63■□□□□ 0.57
Polr1aO35134 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Polr1aO35134 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC18.63■□□□□ 0.57
Polr1aO35134 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr1aO35134 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr1aO35134 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr1aO35134 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr1aO35134 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Polr1aO35134 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr1aO35134 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr1aO35134 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Polr1aO35134 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC18.63■□□□□ 0.57
Polr1aO35134 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Polr1aO35134 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr1aO35134 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC18.63■□□□□ 0.57
Polr1aO35134 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr1aO35134 Gm45594-201ENSMUST00000211717 241 ntBASIC18.63■□□□□ 0.57
Polr1aO35134 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC18.63■□□□□ 0.57
Polr1aO35134 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Polr1aO35134 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Polr1aO35134 n-R5s211-201ENSMUST00000093689 119 ntBASIC18.63■□□□□ 0.57
Polr1aO35134 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Polr1aO35134 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Polr1aO35134 Gm9796-201ENSMUST00000062249 2250 ntBASIC18.62■□□□□ 0.57
Polr1aO35134 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Polr1aO35134 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Polr1aO35134 Gm7504-201ENSMUST00000201449 424 ntBASIC18.62■□□□□ 0.57
Polr1aO35134 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC18.62■□□□□ 0.57
Polr1aO35134 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Gm37437-201ENSMUST00000194451 1937 ntBASIC18.62■□□□□ 0.57
Polr1aO35134 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Gm44152-201ENSMUST00000205007 1691 ntBASIC18.62■□□□□ 0.57
Polr1aO35134 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC18.62■□□□□ 0.57
Polr1aO35134 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Polr1aO35134 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Polr1aO35134 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Polr1aO35134 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Polr1aO35134 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms