Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.35□□□□□ -0.27
Ube3aO08759 Gm2231-201ENSMUST00000125661 612 ntBASIC13.35□□□□□ -0.27
Ube3aO08759 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.35□□□□□ -0.27
Ube3aO08759 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.35□□□□□ -0.27
Ube3aO08759 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 Gm43438-201ENSMUST00000198133 379 ntBASIC13.35□□□□□ -0.27
Ube3aO08759 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.35□□□□□ -0.27
Ube3aO08759 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.35□□□□□ -0.27
Ube3aO08759 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.35□□□□□ -0.27
Ube3aO08759 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.35□□□□□ -0.27
Ube3aO08759 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Ube3aO08759 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Ube3aO08759 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.35□□□□□ -0.27
Ube3aO08759 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube3aO08759 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.34□□□□□ -0.27
Ube3aO08759 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ube3aO08759 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.34□□□□□ -0.27
Ube3aO08759 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Ube3aO08759 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.34□□□□□ -0.27
Ube3aO08759 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ube3aO08759 Proscos-202ENSMUST00000178990 666 ntBASIC13.34□□□□□ -0.27
Ube3aO08759 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.34□□□□□ -0.27
Ube3aO08759 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.34□□□□□ -0.27
Ube3aO08759 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.34□□□□□ -0.27
Ube3aO08759 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.34□□□□□ -0.27
Ube3aO08759 Gm44882-201ENSMUST00000205702 802 ntBASIC13.34□□□□□ -0.27
Ube3aO08759 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Gm5035-201ENSMUST00000215581 927 ntBASIC13.34□□□□□ -0.27
Ube3aO08759 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ube3aO08759 Gm25857-201ENSMUST00000082788 129 ntBASIC13.34□□□□□ -0.27
Ube3aO08759 Gm24136-201ENSMUST00000083374 165 ntBASIC13.34□□□□□ -0.27
Ube3aO08759 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.34□□□□□ -0.27
Ube3aO08759 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.34□□□□□ -0.27
Ube3aO08759 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.34□□□□□ -0.27
Ube3aO08759 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube3aO08759 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.34□□□□□ -0.27
Ube3aO08759 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ube3aO08759 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ube3aO08759 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.33□□□□□ -0.27
Ube3aO08759 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.33□□□□□ -0.27
Ube3aO08759 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube3aO08759 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube3aO08759 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube3aO08759 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.33□□□□□ -0.28
Ube3aO08759 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Ube3aO08759 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube3aO08759 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Ube3aO08759 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.33□□□□□ -0.28
Ube3aO08759 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.33□□□□□ -0.28
Ube3aO08759 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ube3aO08759 Gm10156-201ENSMUST00000122364 462 ntBASIC13.33□□□□□ -0.28
Ube3aO08759 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ube3aO08759 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube3aO08759 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.33□□□□□ -0.28
Ube3aO08759 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.33□□□□□ -0.28
Ube3aO08759 Gm17150-201ENSMUST00000165577 381 ntBASIC13.33□□□□□ -0.28
Ube3aO08759 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube3aO08759 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube3aO08759 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms