Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10553J3QPF1 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10553J3QPF1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm10553J3QPF1 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10553J3QPF1 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10553J3QPF1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10553J3QPF1 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10553J3QPF1 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10553J3QPF1 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Gm10553J3QPF1 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Gm18227-201ENSMUST00000211082 1468 ntBASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Gm9083-201ENSMUST00000120423 819 ntBASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Gm24845-201ENSMUST00000158034 109 ntBASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Gm27046-201ENSMUST00000182160 463 ntBASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 AC169036.1-201ENSMUST00000227994 296 ntBASIC9.43□□□□□ -0.9
Gm10553J3QPF1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Gm10553J3QPF1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Gm5884-201ENSMUST00000036712 1479 ntBASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Gm10553J3QPF1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms