Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.25□□□□□ -0.61
Shisa8J3QNX5 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Shisa8J3QNX5 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Proscos-202ENSMUST00000178990 666 ntBASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Gm37917-201ENSMUST00000194711 392 ntBASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.24□□□□□ -0.61
Shisa8J3QNX5 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa8J3QNX5 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms