Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NpcdF8VQB8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NpcdF8VQB8 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.89□□□□□ -0.03
NpcdF8VQB8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NpcdF8VQB8 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NpcdF8VQB8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NpcdF8VQB8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NpcdF8VQB8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
NpcdF8VQB8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NpcdF8VQB8 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NpcdF8VQB8 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NpcdF8VQB8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NpcdF8VQB8 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NpcdF8VQB8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Gm4726-201ENSMUST00000135604 736 ntBASIC14.88□□□□□ -0.03
NpcdF8VQB8 Gm6019-201ENSMUST00000148369 736 ntBASIC14.88□□□□□ -0.03
NpcdF8VQB8 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NpcdF8VQB8 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.88□□□□□ -0.03
NpcdF8VQB8 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.88□□□□□ -0.03
NpcdF8VQB8 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.88□□□□□ -0.03
NpcdF8VQB8 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Mirlet7i-201ENSMUST00000083472 85 ntBASIC14.88□□□□□ -0.03
NpcdF8VQB8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
NpcdF8VQB8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.88□□□□□ -0.03
NpcdF8VQB8 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.88□□□□□ -0.03
NpcdF8VQB8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NpcdF8VQB8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.87□□□□□ -0.03
NpcdF8VQB8 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.87□□□□□ -0.03
NpcdF8VQB8 Gm25201-201ENSMUST00000083093 170 ntBASIC14.87□□□□□ -0.03
NpcdF8VQB8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.87□□□□□ -0.03
NpcdF8VQB8 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NpcdF8VQB8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NpcdF8VQB8 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NpcdF8VQB8 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms