Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a3E9PWQ3 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a3E9PWQ3 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.96□□□□□ -0.5
Col6a3E9PWQ3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a3E9PWQ3 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a3E9PWQ3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a3E9PWQ3 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.96□□□□□ -0.5
Col6a3E9PWQ3 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a3E9PWQ3 Gm12389-201ENSMUST00000117696 418 ntBASIC11.96□□□□□ -0.5
Col6a3E9PWQ3 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a3E9PWQ3 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC11.96□□□□□ -0.5
Col6a3E9PWQ3 AC107752.1-201ENSMUST00000219362 469 ntBASIC11.96□□□□□ -0.5
Col6a3E9PWQ3 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a3E9PWQ3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a3E9PWQ3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a3E9PWQ3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Coa4-202ENSMUST00000120454 742 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Gm14395-201ENSMUST00000120494 563 ntBASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Gm3150-201ENSMUST00000166418 204 ntBASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Gm38246-201ENSMUST00000194318 1511 ntBASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Gm4705-201ENSMUST00000177415 354 ntBASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 AU015228-201ENSMUST00000121103 1320 ntBASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.95□□□□□ -0.5
Col6a3E9PWQ3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Gm11191-201ENSMUST00000117231 610 ntBASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Gm42821-201ENSMUST00000199771 489 ntBASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Gm6158-201ENSMUST00000109467 904 ntBASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Gm16030-201ENSMUST00000159098 603 ntBASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a3E9PWQ3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a3E9PWQ3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms