Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd3B1AR17 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd3B1AR17 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chd3B1AR17 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd3B1AR17 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd3B1AR17 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.1□□□□□ -0.47
Chd3B1AR17 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.1□□□□□ -0.47
Chd3B1AR17 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chd3B1AR17 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.1□□□□□ -0.47
Chd3B1AR17 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.1□□□□□ -0.47
Chd3B1AR17 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.1□□□□□ -0.47
Chd3B1AR17 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.1□□□□□ -0.47
Chd3B1AR17 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd3B1AR17 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.1□□□□□ -0.47
Chd3B1AR17 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.09□□□□□ -0.47
Chd3B1AR17 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Chd3B1AR17 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Chd3B1AR17 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Gm11511-201ENSMUST00000118146 540 ntBASIC12.09□□□□□ -0.47
Chd3B1AR17 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.09□□□□□ -0.47
Chd3B1AR17 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.09□□□□□ -0.47
Chd3B1AR17 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chd3B1AR17 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.09□□□□□ -0.47
Chd3B1AR17 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Chd3B1AR17 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.09□□□□□ -0.47
Chd3B1AR17 Gm12196-201ENSMUST00000120954 262 ntBASIC12.09□□□□□ -0.47
Chd3B1AR17 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.09□□□□□ -0.47
Chd3B1AR17 Mir7032-201ENSMUST00000185154 79 ntBASIC12.09□□□□□ -0.47
Chd3B1AR17 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.09□□□□□ -0.47
Chd3B1AR17 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.09□□□□□ -0.47
Chd3B1AR17 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Chd3B1AR17 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chd3B1AR17 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd3B1AR17 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chd3B1AR17 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Chd3B1AR17 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.08□□□□□ -0.48
Chd3B1AR17 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 Gm17040-202ENSMUST00000170597 889 ntBASIC12.08□□□□□ -0.48
Chd3B1AR17 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.08□□□□□ -0.48
Chd3B1AR17 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.08□□□□□ -0.48
Chd3B1AR17 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.08□□□□□ -0.48
Chd3B1AR17 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.08□□□□□ -0.48
Chd3B1AR17 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.08□□□□□ -0.48
Chd3B1AR17 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.08□□□□□ -0.48
Chd3B1AR17 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Chd3B1AR17 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd3B1AR17 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.07□□□□□ -0.48
Chd3B1AR17 Gm14644-201ENSMUST00000116671 647 ntBASIC12.07□□□□□ -0.48
Chd3B1AR17 Gm27627-201ENSMUST00000183644 150 ntBASIC12.07□□□□□ -0.48
Chd3B1AR17 Gm17812-201ENSMUST00000204935 318 ntBASIC12.07□□□□□ -0.48
Chd3B1AR17 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms