Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Mir339-201ENSMUST00000083659 96 ntBASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cfap99A0A140LIX9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Gm22334-201ENSMUST00000158070 133 ntBASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Gm25732-201ENSMUST00000175168 60 ntBASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Gm8959-201ENSMUST00000213150 571 ntBASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cfap99A0A140LIX9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Gm13996-201ENSMUST00000118456 430 ntBASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Gm13736-201ENSMUST00000119272 253 ntBASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Gm24514-201ENSMUST00000174961 285 ntBASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Gm10312-201ENSMUST00000078515 489 ntBASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cfap99A0A140LIX9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cfap99A0A140LIX9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Cfap99A0A140LIX9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Cfap99A0A140LIX9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cfap99A0A140LIX9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cfap99A0A140LIX9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cfap99A0A140LIX9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cfap99A0A140LIX9 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cfap99A0A140LIX9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cfap99A0A140LIX9 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cfap99A0A140LIX9 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.77□□□□□ -0.04
Cfap99A0A140LIX9 Gm14921-201ENSMUST00000118643 908 ntBASIC14.77□□□□□ -0.05
Cfap99A0A140LIX9 Gm11331-201ENSMUST00000119764 288 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms