Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb2S4R1M3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
H2afb2S4R1M3 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb2S4R1M3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Gm14999-201ENSMUST00000121039 624 ntBASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Gm38158-201ENSMUST00000194617 339 ntBASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Gm45880-201ENSMUST00000213041 853 ntBASIC12.36□□□□□ -0.43
H2afb2S4R1M3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.36□□□□□ -0.43
H2afb2S4R1M3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb2S4R1M3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Gm13875-201ENSMUST00000120162 282 ntBASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Gm13570-201ENSMUST00000140763 309 ntBASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Mospd4-201ENSMUST00000180618 576 ntBASIC12.35□□□□□ -0.43
H2afb2S4R1M3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 AY702102-202ENSMUST00000194651 1173 ntBASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.35□□□□□ -0.43
H2afb2S4R1M3 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.35□□□□□ -0.43
H2afb2S4R1M3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
H2afb2S4R1M3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms