Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Gm44262-201ENSMUST00000204969 372 ntBASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Nsd1-205ENSMUST00000224693 852 ntBASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lhx9Q9WUH2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Gm10076-201ENSMUST00000073238 384 ntBASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lhx9Q9WUH2 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Gm7857-201ENSMUST00000117957 358 ntBASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Gm14208-201ENSMUST00000119645 678 ntBASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Gm9083-201ENSMUST00000120423 819 ntBASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Gm42937-201ENSMUST00000197360 752 ntBASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Gm3786-201ENSMUST00000202659 378 ntBASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.75□□□□□ -0.53
Lhx9Q9WUH2 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms