Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.62□□□□□ -0.39
RpgrQ9R0X5 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.61□□□□□ -0.39
RpgrQ9R0X5 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Gm13226-201ENSMUST00000117838 404 ntBASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Gm16177-201ENSMUST00000120728 718 ntBASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Snora78-201ENSMUST00000158630 128 ntBASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RpgrQ9R0X5 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Gm23363-201ENSMUST00000175024 79 ntBASIC12.6□□□□□ -0.39
RpgrQ9R0X5 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.6□□□□□ -0.39
RpgrQ9R0X5 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 299.9 ms