Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Gm17826-201ENSMUST00000189720 798 ntBASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Gm43520-201ENSMUST00000197996 164 ntBASIC9.93□□□□□ -0.82
Crlf1Q9JM58 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Gm19009-201ENSMUST00000223072 823 ntBASIC9.93□□□□□ -0.82
Crlf1Q9JM58 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Crlf1Q9JM58 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Gm11949-201ENSMUST00000117640 372 ntBASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Gm7541-201ENSMUST00000118361 535 ntBASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Gm15352-201ENSMUST00000118696 270 ntBASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Gm28388-201ENSMUST00000186262 437 ntBASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 CT571245.2-201ENSMUST00000218421 305 ntBASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Gm6722-201ENSMUST00000221586 390 ntBASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Gm8894-201ENSMUST00000074642 666 ntBASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Crlf1Q9JM58 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Crlf1Q9JM58 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.91□□□□□ -0.82
Crlf1Q9JM58 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Crlf1Q9JM58 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC9.91□□□□□ -0.82
Crlf1Q9JM58 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Crlf1Q9JM58 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Crlf1Q9JM58 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Crlf1Q9JM58 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Crlf1Q9JM58 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC9.91□□□□□ -0.82
Crlf1Q9JM58 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Crlf1Q9JM58 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Crlf1Q9JM58 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Crlf1Q9JM58 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Crlf1Q9JM58 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC9.91□□□□□ -0.82
Crlf1Q9JM58 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Crlf1Q9JM58 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms