Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Snord83b-201ENSMUST00000104546 94 ntBASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Gm25261-201ENSMUST00000157416 134 ntBASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Gm17420-201ENSMUST00000164753 153 ntBASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Gm45880-201ENSMUST00000213041 853 ntBASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Gm32025-201ENSMUST00000217960 307 ntBASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sec61a2Q9JLR1 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Gm37008-201ENSMUST00000195712 319 ntBASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Gm10478-201ENSMUST00000084451 396 ntBASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a2Q9JLR1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.15□□□□□ -0.62
Sec61a2Q9JLR1 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 267.9 ms