Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-4Q9EQM3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Gm13916-201ENSMUST00000117368 628 ntBASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Gm23119-201ENSMUST00000158610 140 ntBASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Gm4654-201ENSMUST00000183305 982 ntBASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Mir6923-201ENSMUST00000184592 72 ntBASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-4Q9EQM3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Gm11511-201ENSMUST00000118146 540 ntBASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Rprl1-201ENSMUST00000158050 327 ntBASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Gm42779-201ENSMUST00000198807 406 ntBASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Gm35713-201ENSMUST00000210516 199 ntBASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Gm19640-201ENSMUST00000214849 464 ntBASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-4Q9EQM3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nkx2-4Q9EQM3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nkx2-4Q9EQM3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms