Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Gm11222-201ENSMUST00000119005 738 ntBASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.52□□□□□ -0.57
Cdc40Q9DC48 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.52□□□□□ -0.57
Cdc40Q9DC48 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdc40Q9DC48 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.52□□□□□ -0.57
Cdc40Q9DC48 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Gm37466-201ENSMUST00000195692 652 ntBASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdc40Q9DC48 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.5□□□□□ -0.57
Cdc40Q9DC48 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms