Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC16.25■□□□□ 0.19
U2af1Q9D883 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
U2af1Q9D883 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC16.25■□□□□ 0.19
U2af1Q9D883 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC16.25■□□□□ 0.19
U2af1Q9D883 Gm45598-202ENSMUST00000210719 986 ntBASIC16.25■□□□□ 0.19
U2af1Q9D883 AC159747.1-201ENSMUST00000219903 265 ntBASIC16.25■□□□□ 0.19
U2af1Q9D883 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.25■□□□□ 0.19
U2af1Q9D883 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
U2af1Q9D883 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Gm44758-201ENSMUST00000206096 2068 ntBASIC16.25■□□□□ 0.19
U2af1Q9D883 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
U2af1Q9D883 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
U2af1Q9D883 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
U2af1Q9D883 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
U2af1Q9D883 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
U2af1Q9D883 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
U2af1Q9D883 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
U2af1Q9D883 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
U2af1Q9D883 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
U2af1Q9D883 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
U2af1Q9D883 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
U2af1Q9D883 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
U2af1Q9D883 Gm13296-201ENSMUST00000117854 997 ntBASIC16.24■□□□□ 0.19
U2af1Q9D883 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
U2af1Q9D883 Gm32999-201ENSMUST00000192693 562 ntBASIC16.24■□□□□ 0.19
U2af1Q9D883 Gm19187-201ENSMUST00000206781 892 ntBASIC16.24■□□□□ 0.19
U2af1Q9D883 Gm7619-201ENSMUST00000210649 1282 ntBASIC16.24■□□□□ 0.19
U2af1Q9D883 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
U2af1Q9D883 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
U2af1Q9D883 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
U2af1Q9D883 Gm8038-201ENSMUST00000164674 2044 ntBASIC16.24■□□□□ 0.19
U2af1Q9D883 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
U2af1Q9D883 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
U2af1Q9D883 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
U2af1Q9D883 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
U2af1Q9D883 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.23■□□□□ 0.19
U2af1Q9D883 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC16.23■□□□□ 0.19
U2af1Q9D883 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC16.23■□□□□ 0.19
U2af1Q9D883 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.23■□□□□ 0.19
U2af1Q9D883 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Gm12997-201ENSMUST00000120207 640 ntBASIC16.23■□□□□ 0.19
U2af1Q9D883 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC16.23■□□□□ 0.19
U2af1Q9D883 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Gm9230-201ENSMUST00000188228 532 ntBASIC16.23■□□□□ 0.19
U2af1Q9D883 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.23■□□□□ 0.19
U2af1Q9D883 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC16.23■□□□□ 0.19
U2af1Q9D883 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.23■□□□□ 0.19
U2af1Q9D883 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
U2af1Q9D883 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
U2af1Q9D883 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
U2af1Q9D883 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.23■□□□□ 0.19
U2af1Q9D883 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
U2af1Q9D883 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
U2af1Q9D883 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
U2af1Q9D883 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Gm44292-201ENSMUST00000205194 2364 ntBASIC16.22■□□□□ 0.19
U2af1Q9D883 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
U2af1Q9D883 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
U2af1Q9D883 Ighv5-7-201ENSMUST00000192302 244 ntBASIC16.22■□□□□ 0.19
U2af1Q9D883 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms