Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Gm13570-201ENSMUST00000140763 309 ntBASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Gm2546-201ENSMUST00000182630 991 ntBASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Gm42627-201ENSMUST00000197347 224 ntBASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Pck2-205ENSMUST00000226352 2784 ntBASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx56Q9D0R4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Gm43118-201ENSMUST00000199149 775 ntBASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Gm18054-201ENSMUST00000207539 555 ntBASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Gm8227-201ENSMUST00000223306 571 ntBASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx56Q9D0R4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Gm17420-201ENSMUST00000164753 153 ntBASIC13□□□□□ -0.33
Ddx56Q9D0R4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Gm8801-201ENSMUST00000173255 1064 ntBASIC13□□□□□ -0.33
Ddx56Q9D0R4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Gm5597-201ENSMUST00000182353 1193 ntBASIC13□□□□□ -0.33
Ddx56Q9D0R4 Gm27572-201ENSMUST00000183702 255 ntBASIC13□□□□□ -0.33
Ddx56Q9D0R4 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13□□□□□ -0.33
Ddx56Q9D0R4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Gm19963-201ENSMUST00000208413 1255 ntBASIC13□□□□□ -0.33
Ddx56Q9D0R4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ddx56Q9D0R4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ddx56Q9D0R4 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms