Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Ssbp3Q9D032 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ssbp3Q9D032 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ssbp3Q9D032 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ssbp3Q9D032 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ssbp3Q9D032 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Mir877-201ENSMUST00000104738 85 ntBASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Gm14999-201ENSMUST00000121039 624 ntBASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.34□□□□□ -0.75
Ssbp3Q9D032 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Gm27046-201ENSMUST00000182160 463 ntBASIC10.34□□□□□ -0.75
Ssbp3Q9D032 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ssbp3Q9D032 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm11930-201ENSMUST00000117788 190 ntBASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm15703-201ENSMUST00000120250 880 ntBASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm13315-201ENSMUST00000120376 991 ntBASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm3096-201ENSMUST00000185770 364 ntBASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ssbp3Q9D032 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms