Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Syt7-204ENSMUST00000223586 1344 ntBASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Hdhd3Q9CYW4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Gm6152-201ENSMUST00000151704 340 ntBASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Gm42599-201ENSMUST00000201308 469 ntBASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.04□□□□□ -0.8
Hdhd3Q9CYW4 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Gm15429-201ENSMUST00000151268 798 ntBASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Mir7684-201ENSMUST00000183858 60 ntBASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Mir8102-201ENSMUST00000184148 139 ntBASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Gm6218-201ENSMUST00000219812 628 ntBASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Hdhd3Q9CYW4 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms