Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim13Q9CYB0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Gm15429-201ENSMUST00000151268 798 ntBASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.44□□□□□ -0.58
Trim13Q9CYB0 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim13Q9CYB0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Gm6754-201ENSMUST00000117124 913 ntBASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Gm14760-201ENSMUST00000121831 999 ntBASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Mir7654-201ENSMUST00000185082 70 ntBASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Gm18473-201ENSMUST00000220543 868 ntBASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Gm8227-201ENSMUST00000223306 571 ntBASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms