Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Gm16479-201ENSMUST00000121706 932 ntBASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Gm10156-201ENSMUST00000122364 462 ntBASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Gm6244-201ENSMUST00000178732 841 ntBASIC13.5□□□□□ -0.25
Ssr1Q9CY50 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.5□□□□□ -0.25
Ssr1Q9CY50 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ssr1Q9CY50 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.49□□□□□ -0.25
Ssr1Q9CY50 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ssr1Q9CY50 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr1Q9CY50 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ssr1Q9CY50 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ssr1Q9CY50 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr1Q9CY50 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ssr1Q9CY50 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms