Protein–RNA interactions for Protein: Q99PV5

Bhlhe41, Class E basic helix-loop-helix protein 41, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe41Q99PV5 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Rmrp-201ENSMUST00000157463 271 ntBASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Matn2-203ENSMUST00000226766 3252 ntBASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Bhlhe41Q99PV5 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Gm13736-201ENSMUST00000119272 253 ntBASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Gm13315-201ENSMUST00000120376 991 ntBASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Gm11597-201ENSMUST00000121423 964 ntBASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Gm8062-201ENSMUST00000139696 444 ntBASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Gm9630-201ENSMUST00000178304 885 ntBASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Gm38002-201ENSMUST00000193255 180 ntBASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Gm38158-201ENSMUST00000194617 339 ntBASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Gm43133-201ENSMUST00000197472 463 ntBASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Gm44405-201ENSMUST00000198952 126 ntBASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Gm45925-201ENSMUST00000218882 744 ntBASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Bhlhe41Q99PV5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Bhlhe41Q99PV5 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Bhlhe41Q99PV5 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Bhlhe41Q99PV5 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Bhlhe41Q99PV5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Bhlhe41Q99PV5 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms