Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Gm28911-201ENSMUST00000188837 117 ntBASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 BC043934-202ENSMUST00000185694 2356 ntBASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trim8Q99PJ2 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Trim8Q99PJ2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Gm16296-201ENSMUST00000159905 325 ntBASIC12.14□□□□□ -0.47
Trim8Q99PJ2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Gm27390-201ENSMUST00000184516 176 ntBASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Gm37042-201ENSMUST00000193816 581 ntBASIC12.14□□□□□ -0.47
Trim8Q99PJ2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim8Q99PJ2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Cog3-203ENSMUST00000227473 4197 ntBASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Gm12203-201ENSMUST00000118235 598 ntBASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Gm12209-201ENSMUST00000120089 596 ntBASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Gm10156-201ENSMUST00000122364 462 ntBASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Gm27701-201ENSMUST00000184498 110 ntBASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim8Q99PJ2 Gm37922-201ENSMUST00000195596 455 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms