Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh15Q99PJ1 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Gm11957-201ENSMUST00000118304 779 ntBASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Gm14270-201ENSMUST00000118388 846 ntBASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 AC138716.2-201ENSMUST00000226670 1016 ntBASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Mir326-201ENSMUST00000083637 95 ntBASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh15Q99PJ1 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Gm16030-201ENSMUST00000159098 603 ntBASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh15Q99PJ1 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms