Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 AC187103.3-201ENSMUST00000225725 646 ntBASIC12.24□□□□□ -0.45
Cdh23Q99PF4 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Gm8956-201ENSMUST00000203939 825 ntBASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Gm23105-201ENSMUST00000083719 134 ntBASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm13171-201ENSMUST00000117233 391 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm11783-201ENSMUST00000119549 885 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm23400-201ENSMUST00000174994 102 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm26463-201ENSMUST00000175065 101 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm24332-201ENSMUST00000175102 102 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm25959-201ENSMUST00000175112 102 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm22475-201ENSMUST00000175169 102 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm22903-201ENSMUST00000175193 102 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm25070-201ENSMUST00000175237 102 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm24159-201ENSMUST00000175264 102 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm25299-201ENSMUST00000175283 102 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm23798-201ENSMUST00000175560 102 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm23802-201ENSMUST00000175565 102 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm25708-201ENSMUST00000177687 102 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm24370-201ENSMUST00000178007 102 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm23049-201ENSMUST00000178068 102 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm28019-201ENSMUST00000178138 101 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm25571-201ENSMUST00000178322 102 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm25355-201ENSMUST00000178456 101 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm24975-201ENSMUST00000178492 101 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm23189-201ENSMUST00000178954 102 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm25100-201ENSMUST00000179750 101 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm23064-201ENSMUST00000179866 101 ntBASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdh23Q99PF4 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Gm15707-201ENSMUST00000118804 996 ntBASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdh23Q99PF4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms