Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Gm23675-201ENSMUST00000157311 125 ntBASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Gm22144-201ENSMUST00000157402 102 ntBASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Gm17877-201ENSMUST00000192578 814 ntBASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Gm44647-201ENSMUST00000207402 428 ntBASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Gm2875-201ENSMUST00000211333 360 ntBASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Gm45925-201ENSMUST00000218882 744 ntBASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Gm13809-201ENSMUST00000117921 597 ntBASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Gm11956-201ENSMUST00000119525 512 ntBASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Gm9645-201ENSMUST00000197131 792 ntBASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col25a1Q99MQ5 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col25a1Q99MQ5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col25a1Q99MQ5 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Col25a1Q99MQ5 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.83□□□□□ -0.35
Col25a1Q99MQ5 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Gm24791-201ENSMUST00000104284 131 ntBASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Gm24891-201ENSMUST00000104391 136 ntBASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Gm25063-201ENSMUST00000104666 94 ntBASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Gm13736-201ENSMUST00000119272 253 ntBASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Gm16071-201ENSMUST00000119589 793 ntBASIC12.83□□□□□ -0.36
Col25a1Q99MQ5 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms