Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Gm13875-201ENSMUST00000120162 282 ntBASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Gm9083-201ENSMUST00000120423 819 ntBASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Gm14999-201ENSMUST00000121039 624 ntBASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Gm7046-201ENSMUST00000221351 977 ntBASIC13.3□□□□□ -0.28
Tlr3Q99MB1 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tlr3Q99MB1 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Mir5132-201ENSMUST00000175166 71 ntBASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Gm2546-201ENSMUST00000182630 991 ntBASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Gm44958-201ENSMUST00000203734 736 ntBASIC13.29□□□□□ -0.28
Tlr3Q99MB1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.29□□□□□ -0.28
Tlr3Q99MB1 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.29□□□□□ -0.28
Tlr3Q99MB1 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Gm17376-201ENSMUST00000166016 84 ntBASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tlr3Q99MB1 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms