Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Gm6091-201ENSMUST00000098307 165 ntBASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Cog3-203ENSMUST00000227473 4197 ntBASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Gm29649-201ENSMUST00000185649 419 ntBASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Gm9794-201ENSMUST00000202370 423 ntBASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Gm44882-201ENSMUST00000205702 802 ntBASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdk5rap3Q99LM2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Gm11597-201ENSMUST00000121423 964 ntBASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Gm35960-201ENSMUST00000202712 767 ntBASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Gm5035-201ENSMUST00000215581 927 ntBASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdk5rap3Q99LM2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms