Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb1Q91Y08 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Gm42627-201ENSMUST00000197347 224 ntBASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Gm43118-201ENSMUST00000199149 775 ntBASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb1Q91Y08 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Gm13786-201ENSMUST00000122371 333 ntBASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Gm18054-201ENSMUST00000207539 555 ntBASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pcdhb1Q91Y08 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdhb1Q91Y08 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb1Q91Y08 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb1Q91Y08 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb1Q91Y08 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb1Q91Y08 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms