Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Gm23251-201ENSMUST00000103773 110 ntBASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Gm3332-201ENSMUST00000189337 928 ntBASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Gm37246-201ENSMUST00000192665 835 ntBASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Gm4607-201ENSMUST00000206649 577 ntBASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhb5Q91XZ5 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Gm13461-201ENSMUST00000120980 662 ntBASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Gm5733-201ENSMUST00000190232 939 ntBASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Gm4482-201ENSMUST00000200876 742 ntBASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Gm45770-201ENSMUST00000212105 616 ntBASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb5Q91XZ5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Gm7851-201ENSMUST00000117574 323 ntBASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Gm10051-201ENSMUST00000145209 414 ntBASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Gm18711-201ENSMUST00000199341 750 ntBASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Gm4157-201ENSMUST00000211647 679 ntBASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms