Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb8Q91XZ2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb8Q91XZ2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb8Q91XZ2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb8Q91XZ2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb8Q91XZ2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb8Q91XZ2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb8Q91XZ2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb8Q91XZ2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb8Q91XZ2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb8Q91XZ2 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb8Q91XZ2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb8Q91XZ2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb8Q91XZ2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Gm45925-201ENSMUST00000218882 744 ntBASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.1□□□□□ -0.47
Pcdhb8Q91XZ2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Gm11425-201ENSMUST00000119608 498 ntBASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Gm9396-201ENSMUST00000076703 567 ntBASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb8Q91XZ2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms