Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Gm14760-201ENSMUST00000121831 999 ntBASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Gm12363-201ENSMUST00000122250 668 ntBASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Gm43818-201ENSMUST00000200605 466 ntBASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Gm40466-201ENSMUST00000212174 422 ntBASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Gm32025-201ENSMUST00000217960 307 ntBASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhga11Q91XY8 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga11Q91XY8 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga11Q91XY8 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Pcdhga11Q91XY8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga11Q91XY8 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga11Q91XY8 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Gm13492-201ENSMUST00000119772 665 ntBASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga11Q91XY8 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Gm7029-201ENSMUST00000173226 450 ntBASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdhga11Q91XY8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms