Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Gm27516-201ENSMUST00000184237 98 ntBASIC12.29□□□□□ -0.44
Usb1Q91W78 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.29□□□□□ -0.44
Usb1Q91W78 Gm37489-201ENSMUST00000191883 159 ntBASIC12.29□□□□□ -0.44
Usb1Q91W78 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Usb1Q91W78 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Usb1Q91W78 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.29□□□□□ -0.44
Usb1Q91W78 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Usb1Q91W78 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Usb1Q91W78 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Usb1Q91W78 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usb1Q91W78 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usb1Q91W78 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.28□□□□□ -0.44
Usb1Q91W78 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Usb1Q91W78 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usb1Q91W78 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.28□□□□□ -0.44
Usb1Q91W78 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usb1Q91W78 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.28□□□□□ -0.44
Usb1Q91W78 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.28□□□□□ -0.44
Usb1Q91W78 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.28□□□□□ -0.44
Usb1Q91W78 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.28□□□□□ -0.44
Usb1Q91W78 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.28□□□□□ -0.44
Usb1Q91W78 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usb1Q91W78 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.28□□□□□ -0.44
Usb1Q91W78 Gm10608-202ENSMUST00000213924 676 ntBASIC12.28□□□□□ -0.44
Usb1Q91W78 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usb1Q91W78 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.28□□□□□ -0.44
Usb1Q91W78 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.28□□□□□ -0.44
Usb1Q91W78 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Usb1Q91W78 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usb1Q91W78 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usb1Q91W78 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.28□□□□□ -0.44
Usb1Q91W78 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usb1Q91W78 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usb1Q91W78 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usb1Q91W78 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Usb1Q91W78 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usb1Q91W78 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usb1Q91W78 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usb1Q91W78 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Usb1Q91W78 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usb1Q91W78 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usb1Q91W78 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usb1Q91W78 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usb1Q91W78 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Usb1Q91W78 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usb1Q91W78 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usb1Q91W78 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usb1Q91W78 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Usb1Q91W78 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Usb1Q91W78 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usb1Q91W78 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usb1Q91W78 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Usb1Q91W78 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usb1Q91W78 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Usb1Q91W78 Gm8738-201ENSMUST00000172606 329 ntBASIC12.27□□□□□ -0.45
Usb1Q91W78 Mir8109-201ENSMUST00000184375 117 ntBASIC12.27□□□□□ -0.45
Usb1Q91W78 Gm38158-201ENSMUST00000194617 339 ntBASIC12.27□□□□□ -0.45
Usb1Q91W78 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Usb1Q91W78 Gm44124-201ENSMUST00000204159 472 ntBASIC12.27□□□□□ -0.45
Usb1Q91W78 Gm7783-201ENSMUST00000204795 781 ntBASIC12.27□□□□□ -0.45
Usb1Q91W78 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.27□□□□□ -0.45
Usb1Q91W78 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.27□□□□□ -0.45
Usb1Q91W78 Gm8227-201ENSMUST00000223306 571 ntBASIC12.27□□□□□ -0.45
Usb1Q91W78 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usb1Q91W78 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Usb1Q91W78 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.27□□□□□ -0.45
Usb1Q91W78 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usb1Q91W78 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usb1Q91W78 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usb1Q91W78 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usb1Q91W78 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usb1Q91W78 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.27□□□□□ -0.45
Usb1Q91W78 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usb1Q91W78 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usb1Q91W78 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Usb1Q91W78 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Usb1Q91W78 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Usb1Q91W78 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms