Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Usp3Q91W36 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Usp3Q91W36 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Usp3Q91W36 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 AC163296.2-201ENSMUST00000220177 1315 ntBASIC12.84□□□□□ -0.35
Usp3Q91W36 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Usp3Q91W36 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Usp3Q91W36 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Usp3Q91W36 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp3Q91W36 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Usp3Q91W36 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.83□□□□□ -0.35
Usp3Q91W36 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Usp3Q91W36 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.83□□□□□ -0.35
Usp3Q91W36 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Usp3Q91W36 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Usp3Q91W36 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Usp3Q91W36 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.83□□□□□ -0.36
Usp3Q91W36 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Gm14109-201ENSMUST00000118814 309 ntBASIC12.83□□□□□ -0.36
Usp3Q91W36 Gm9440-201ENSMUST00000119667 539 ntBASIC12.83□□□□□ -0.36
Usp3Q91W36 Gm12372-201ENSMUST00000121654 768 ntBASIC12.83□□□□□ -0.36
Usp3Q91W36 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.83□□□□□ -0.36
Usp3Q91W36 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.83□□□□□ -0.36
Usp3Q91W36 Gm38317-201ENSMUST00000195564 343 ntBASIC12.83□□□□□ -0.36
Usp3Q91W36 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.83□□□□□ -0.36
Usp3Q91W36 Gm18944-201ENSMUST00000207672 643 ntBASIC12.83□□□□□ -0.36
Usp3Q91W36 AC158388.1-201ENSMUST00000225441 256 ntBASIC12.83□□□□□ -0.36
Usp3Q91W36 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.83□□□□□ -0.36
Usp3Q91W36 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Usp3Q91W36 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Usp3Q91W36 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Usp3Q91W36 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Usp3Q91W36 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp3Q91W36 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp3Q91W36 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.82□□□□□ -0.36
Usp3Q91W36 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp3Q91W36 AC140393.3-201ENSMUST00000228396 1352 ntBASIC12.82□□□□□ -0.36
Usp3Q91W36 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Usp3Q91W36 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp3Q91W36 Gm24830-201ENSMUST00000102024 166 ntBASIC12.82□□□□□ -0.36
Usp3Q91W36 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.82□□□□□ -0.36
Usp3Q91W36 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp3Q91W36 Gm15061-201ENSMUST00000121076 1046 ntBASIC12.82□□□□□ -0.36
Usp3Q91W36 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Usp3Q91W36 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp3Q91W36 Gm25890-201ENSMUST00000177643 165 ntBASIC12.82□□□□□ -0.36
Usp3Q91W36 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.82□□□□□ -0.36
Usp3Q91W36 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.82□□□□□ -0.36
Usp3Q91W36 Gm22614-201ENSMUST00000178300 165 ntBASIC12.82□□□□□ -0.36
Usp3Q91W36 Gm27046-201ENSMUST00000182160 463 ntBASIC12.82□□□□□ -0.36
Usp3Q91W36 AA914427-201ENSMUST00000193194 1166 ntBASIC12.82□□□□□ -0.36
Usp3Q91W36 Gm44146-201ENSMUST00000203508 816 ntBASIC12.82□□□□□ -0.36
Usp3Q91W36 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC12.82□□□□□ -0.36
Usp3Q91W36 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms