Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhb21Q91V48 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhb21Q91V48 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhb21Q91V48 Gm10076-201ENSMUST00000073238 384 ntBASIC12.3□□□□□ -0.44
Pcdhb21Q91V48 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdhb21Q91V48 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb21Q91V48 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb21Q91V48 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb21Q91V48 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb21Q91V48 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb21Q91V48 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb21Q91V48 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb21Q91V48 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Gm15370-201ENSMUST00000117158 253 ntBASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Gm12314-201ENSMUST00000118104 538 ntBASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Gm13342-201ENSMUST00000121055 207 ntBASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Gm2546-201ENSMUST00000182630 991 ntBASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Gm44364-201ENSMUST00000198368 141 ntBASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb21Q91V48 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb21Q91V48 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms