Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm23949-201ENSMUST00000104027 127 ntBASIC13.25□□□□□ -0.29
TraipQ8VIG6 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Gm27552-201ENSMUST00000183351 62 ntBASIC13.25□□□□□ -0.29
TraipQ8VIG6 Gm27844-201ENSMUST00000183613 62 ntBASIC13.25□□□□□ -0.29
TraipQ8VIG6 Gm28450-201ENSMUST00000187349 638 ntBASIC13.25□□□□□ -0.29
TraipQ8VIG6 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.25□□□□□ -0.29
TraipQ8VIG6 AC129323.1-201ENSMUST00000216733 470 ntBASIC13.25□□□□□ -0.29
TraipQ8VIG6 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.25□□□□□ -0.29
TraipQ8VIG6 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.25□□□□□ -0.29
TraipQ8VIG6 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TraipQ8VIG6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Gm23200-201ENSMUST00000104379 132 ntBASIC13.24□□□□□ -0.29
TraipQ8VIG6 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.24□□□□□ -0.29
TraipQ8VIG6 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TraipQ8VIG6 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Gm9630-201ENSMUST00000178304 885 ntBASIC13.24□□□□□ -0.29
TraipQ8VIG6 Gm4870-201ENSMUST00000198525 1251 ntBASIC13.24□□□□□ -0.29
TraipQ8VIG6 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Gm16551-203ENSMUST00000160979 3162 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Gm26670-201ENSMUST00000180429 3287 ntBASIC13.24□□□□□ -0.29
TraipQ8VIG6 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TraipQ8VIG6 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.23□□□□□ -0.29
TraipQ8VIG6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.23□□□□□ -0.29
TraipQ8VIG6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.23□□□□□ -0.29
TraipQ8VIG6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Gm22133-201ENSMUST00000102082 109 ntBASIC13.23□□□□□ -0.29
TraipQ8VIG6 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Gm12380-201ENSMUST00000119012 544 ntBASIC13.23□□□□□ -0.29
TraipQ8VIG6 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.23□□□□□ -0.29
TraipQ8VIG6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.23□□□□□ -0.29
TraipQ8VIG6 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TraipQ8VIG6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.23□□□□□ -0.29
TraipQ8VIG6 Gm18038-201ENSMUST00000197900 485 ntBASIC13.23□□□□□ -0.29
TraipQ8VIG6 Gm43962-201ENSMUST00000203898 190 ntBASIC13.23□□□□□ -0.29
TraipQ8VIG6 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.23□□□□□ -0.29
TraipQ8VIG6 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.23□□□□□ -0.29
TraipQ8VIG6 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TraipQ8VIG6 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms