Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Gm18038-201ENSMUST00000197900 485 ntBASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp33Q8R5K2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp33Q8R5K2 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp33Q8R5K2 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Usp33Q8R5K2 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp33Q8R5K2 Gm25881-201ENSMUST00000157783 103 ntBASIC14.27□□□□□ -0.13
Usp33Q8R5K2 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp33Q8R5K2 Gm43962-201ENSMUST00000203898 190 ntBASIC14.27□□□□□ -0.13
Usp33Q8R5K2 Gm8285-201ENSMUST00000208293 759 ntBASIC14.27□□□□□ -0.13
Usp33Q8R5K2 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Usp33Q8R5K2 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Usp33Q8R5K2 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.27□□□□□ -0.13
Usp33Q8R5K2 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.27□□□□□ -0.13
Usp33Q8R5K2 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp33Q8R5K2 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp33Q8R5K2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Usp33Q8R5K2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp33Q8R5K2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp33Q8R5K2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp33Q8R5K2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp33Q8R5K2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp33Q8R5K2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Gm38273-201ENSMUST00000194987 2382 ntBASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.26□□□□□ -0.13
Usp33Q8R5K2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp33Q8R5K2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp33Q8R5K2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp33Q8R5K2 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp33Q8R5K2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Usp33Q8R5K2 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms