Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Gm24231-201ENSMUST00000104315 133 ntBASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Gm15703-201ENSMUST00000120250 880 ntBASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Gm21854-201ENSMUST00000179901 471 ntBASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Btrc-209ENSMUST00000224478 2194 ntBASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Ebf4Q8K4J2 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Gm14921-201ENSMUST00000118643 908 ntBASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Gm15920-201ENSMUST00000118998 402 ntBASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Gm14704-201ENSMUST00000120300 874 ntBASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Mir6956-201ENSMUST00000183598 62 ntBASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Gm27430-201ENSMUST00000184585 107 ntBASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Gm44333-201ENSMUST00000197168 107 ntBASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Gm9063-201ENSMUST00000223299 582 ntBASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms