Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Gm2546-201ENSMUST00000182630 991 ntBASIC11.68□□□□□ -0.54
Clrn1Q8K445 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Gm29396-201ENSMUST00000185659 716 ntBASIC11.68□□□□□ -0.54
Clrn1Q8K445 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Gm37489-201ENSMUST00000191883 159 ntBASIC11.68□□□□□ -0.54
Clrn1Q8K445 Gm42693-201ENSMUST00000196779 631 ntBASIC11.68□□□□□ -0.54
Clrn1Q8K445 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.68□□□□□ -0.54
Clrn1Q8K445 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Gm12314-201ENSMUST00000118104 538 ntBASIC11.67□□□□□ -0.54
Clrn1Q8K445 Gm14999-201ENSMUST00000121039 624 ntBASIC11.67□□□□□ -0.54
Clrn1Q8K445 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Gm39404-201ENSMUST00000216350 313 ntBASIC11.67□□□□□ -0.54
Clrn1Q8K445 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.67□□□□□ -0.54
Clrn1Q8K445 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clrn1Q8K445 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.67□□□□□ -0.54
Clrn1Q8K445 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.67□□□□□ -0.54
Clrn1Q8K445 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.66□□□□□ -0.54
Clrn1Q8K445 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Gm15370-201ENSMUST00000117158 253 ntBASIC11.66□□□□□ -0.54
Clrn1Q8K445 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.66□□□□□ -0.54
Clrn1Q8K445 Gm13786-201ENSMUST00000122371 333 ntBASIC11.66□□□□□ -0.54
Clrn1Q8K445 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.66□□□□□ -0.54
Clrn1Q8K445 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.66□□□□□ -0.54
Clrn1Q8K445 Olfr284-202ENSMUST00000206647 966 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms