Protein–RNA interactions for Protein: Q8K2F3

Depp1, Protein DEPP1, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depp1Q8K2F3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Depp1Q8K2F3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Depp1Q8K2F3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Depp1Q8K2F3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Depp1Q8K2F3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Depp1Q8K2F3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Depp1Q8K2F3 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Depp1Q8K2F3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Depp1Q8K2F3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Depp1Q8K2F3 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.58□□□□□ -0.72
Depp1Q8K2F3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Depp1Q8K2F3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Gm13315-201ENSMUST00000120376 991 ntBASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Gm7653-201ENSMUST00000214567 508 ntBASIC10.57□□□□□ -0.72
Depp1Q8K2F3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Depp1Q8K2F3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Gm11478-201ENSMUST00000117851 599 ntBASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Gm12502-201ENSMUST00000120197 444 ntBASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Gm29127-201ENSMUST00000188304 517 ntBASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Gm42599-201ENSMUST00000201308 469 ntBASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Gm22058-201ENSMUST00000083393 310 ntBASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Depp1Q8K2F3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms