Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Gm12058-201ENSMUST00000118614 437 ntBASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Gm26035-201ENSMUST00000083065 308 ntBASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rfwd3Q8CIK8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Pck2-205ENSMUST00000226352 2784 ntBASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Gm4986-201ENSMUST00000119731 549 ntBASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Gm37489-201ENSMUST00000191883 159 ntBASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Gm10608-202ENSMUST00000213924 676 ntBASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Morn2-202ENSMUST00000227729 656 ntBASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rfwd3Q8CIK8 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms