Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.1□□□□□ -0.47
Rab43Q8CG50 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Gm24231-201ENSMUST00000104315 133 ntBASIC12.1□□□□□ -0.47
Rab43Q8CG50 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.1□□□□□ -0.47
Rab43Q8CG50 Mir1943-201ENSMUST00000158276 73 ntBASIC12.1□□□□□ -0.47
Rab43Q8CG50 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Gm9022-201ENSMUST00000182482 992 ntBASIC12.1□□□□□ -0.47
Rab43Q8CG50 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.1□□□□□ -0.47
Rab43Q8CG50 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.1□□□□□ -0.47
Rab43Q8CG50 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Gm19994-201ENSMUST00000217086 586 ntBASIC12.1□□□□□ -0.47
Rab43Q8CG50 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rab43Q8CG50 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab43Q8CG50 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.1□□□□□ -0.47
Rab43Q8CG50 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Rab43Q8CG50 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rab43Q8CG50 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.09□□□□□ -0.47
Rab43Q8CG50 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Gm9550-201ENSMUST00000161130 862 ntBASIC12.09□□□□□ -0.47
Rab43Q8CG50 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.09□□□□□ -0.47
Rab43Q8CG50 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab43Q8CG50 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rab43Q8CG50 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rab43Q8CG50 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Rab43Q8CG50 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab43Q8CG50 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab43Q8CG50 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab43Q8CG50 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rab43Q8CG50 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rab43Q8CG50 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab43Q8CG50 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab43Q8CG50 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab43Q8CG50 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab43Q8CG50 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab43Q8CG50 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.08□□□□□ -0.48
Rab43Q8CG50 Gm22133-201ENSMUST00000102082 109 ntBASIC12.08□□□□□ -0.48
Rab43Q8CG50 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Rab43Q8CG50 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.08□□□□□ -0.48
Rab43Q8CG50 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.08□□□□□ -0.48
Rab43Q8CG50 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab43Q8CG50 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.08□□□□□ -0.48
Rab43Q8CG50 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.08□□□□□ -0.48
Rab43Q8CG50 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab43Q8CG50 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Rab43Q8CG50 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab43Q8CG50 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms