Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Gm13226-201ENSMUST00000117838 404 ntBASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Gm24644-201ENSMUST00000157114 139 ntBASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Gm6091-201ENSMUST00000098307 165 ntBASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lrif1Q8CDD9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Gm16372-201ENSMUST00000073088 450 ntBASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lrif1Q8CDD9 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms