Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Gm26185-201ENSMUST00000157692 266 ntBASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Gm23119-201ENSMUST00000158610 140 ntBASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Gm37497-201ENSMUST00000195830 798 ntBASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Gm24526-201ENSMUST00000082921 158 ntBASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lysmd4Q8CC84 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Gm45668-201ENSMUST00000211271 493 ntBASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lysmd4Q8CC84 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms